Structure of PDB 7oqb Chain U

Receptor sequence
>7oqbU (length=188) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
LSKGENVPYTFQDEQVRSNPYIYKNHSGKLVCKLCNTMHMSWSSVERHLG
GKKHGLNVLRRGISIEKAAAAAAAAAAAAAAAAGSVGLAIQVNYSSEVKE
NSVDSDDKAKVPPLIRIVSGLELSDTKQKGKKFLVIAYEPFENIAIELPP
NEILFSENNDMDNNNDGVDELNKKCTFWDAISKLYYVQ
3D structure
PDB7oqb Structural insights into how Prp5 proofreads the pre-mRNA branch site.
ChainU
Resolution9.0 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 rna U S100 K103 S64 K67
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0008270 zinc ion binding

View graph for
Molecular Function
External links
PDB RCSB:7oqb, PDBe:7oqb, PDBj:7oqb
PDBsum7oqb
PubMed34349264
UniProtQ07350|PRP11_YEAST Pre-mRNA-splicing factor PRP11 (Gene Name=PRP11)

[Back to BioLiP]