Structure of PDB 6yef Chain U

Receptor sequence
>6yefU (length=100) Species: 93061 (Staphylococcus aureus subsp. aureus NCTC 8325) [Search protein sequence]
MFAIIETGGKQIKVEEGQEIFVEKLDVNEGDTFTFDKVLFVGGSVKVGAT
VEGATVTATVNKQGRGKKITVFTYKRRKNSKRKKGHRQPYTKLTIDKINA
3D structure
PDB6yef Cryo-EM structure of the ribosome functional complex of the human pathogen Staphylococcus aureus at 3.2 angstrom resolution.
ChainU
Resolution3.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna U G9 K10 F21 E23 K24 K64 R67 K70 R78 R79 K80 R84 K85 K86 G87 H88 R89 Q90 Y92 G9 K10 F21 E23 K24 K62 R65 K68 R76 R77 K78 R82 K83 K84 G85 H86 R87 Q88 Y90
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:6yef, PDBe:6yef, PDBj:6yef
PDBsum6yef
PubMed32852796
UniProtQ2FXS8|RL21_STAA8 Large ribosomal subunit protein bL21 (Gene Name=rplU)

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