Structure of PDB 6osk Chain U

Receptor sequence
>6oskU (length=103) Species: 562 (Escherichia coli) [Search protein sequence]
AAKIRRDDEVIVLTGKDKGKRGKVKNVLSSGKVIVEGINLVKKHQKPVPA
LNQPGGIVEKEAAIQVSNVAIFNAATGKADRVGFRFEDGKKVRFFKSNSE
TIK
3D structure
PDB6osk The structural basis for release-factor activation during translation termination revealed by time-resolved cryogenic electron microscopy.
ChainU
Resolution3.6 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna U A2 K4 R6 R7 G16 K17 V28 S30 K43 K44 H45 P48 G56 G57 S68 N69 R82 G84 F85 F87 K92 K97 A1 K3 R5 R6 G15 K16 V27 S29 K42 K43 H44 P47 G55 G56 S67 N68 R81 G83 F84 F86 K91 K96
BS02 MG U S68 N69 S67 N68
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0019843 rRNA binding
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6osk, PDBe:6osk, PDBj:6osk
PDBsum6osk
PubMed31189921
UniProtP60624|RL24_ECOLI Large ribosomal subunit protein uL24 (Gene Name=rplX)

[Back to BioLiP]