Structure of PDB 6b4v Chain U

Receptor sequence
>6b4vU (length=95) Species: 262724 (Thermus thermophilus HB27) [Search protein sequence]
MKTAYDVILAPVLSEKAYAGFAEGKYTFWVHPKATKTEIKNAVETAFKVK
VVKVNTLHVRGKKKRLGRYLGKRPDRKKAIVQVAPGQKIEALEGL
3D structure
PDB6b4v Mechanism of Inhibition of Translation Termination by Blasticidin S.
ChainU
Resolution3.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna U M1 S14 E15 K16 K25 T35 K36 T37 E38 K40 N41 K53 N55 T56 L57 H58 R60 K62 K63 K64 L66 Y69 L70 G71 R73 P74 D75 K78 I80 M1 S14 E15 K16 K25 T35 K36 T37 E38 K40 N41 K53 N55 T56 L57 H58 R60 K62 K63 K64 L66 Y69 L70 G71 R73 P74 D75 K78 I80
BS02 MG U P32 K33 P32 K33
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:6b4v, PDBe:6b4v, PDBj:6b4v
PDBsum6b4v
PubMed29366636
UniProtQ72I06|RL23_THET2 Large ribosomal subunit protein uL23 (Gene Name=rplW)

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