Structure of PDB 5jvg Chain U

Receptor sequence
>5jvgU (length=74) Species: 243230 (Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539) [Search protein sequence]
YLTGKKNLVVNSVIRRGKARADGGVGRKTTGITKRVQRANLHKKAIRENG
QVKTVWLSANALRTLSKGPYKGIE
3D structure
PDB5jvg Avilamycin and evernimicin induce structural changes in rProteins uL16 and CTC that enhance the inhibition of A-site tRNA binding.
ChainU
Resolution3.428 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna U Y6 L7 V15 V18 I19 R20 R21 D27 R32 K33 T34 T35 G36 I37 T38 V41 R43 N45 L46 H47 K48 K49 A64 R68 Y1 L2 V10 V13 I14 R15 R16 D22 R27 K28 T29 T30 G31 I32 T33 V36 R38 N40 L41 H42 K43 K44 A59 R63
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:5jvg, PDBe:5jvg, PDBj:5jvg
PDBsum5jvg
PubMed27791159
UniProtQ9RRG8|RL28_DEIRA Large ribosomal subunit protein bL28 (Gene Name=rpmB)

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