Structure of PDB 5iya Chain U

Receptor sequence
>5iyaU (length=170) Species: 9606 (Homo sapiens) [Search protein sequence]
RAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIR
NTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD
ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSA
DEPMTTFVVCNECGNRWKFC
3D structure
PDB5iya Near-atomic resolution visualization of human transcription promoter opening.
ChainU
Resolution5.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN U C263 C291 C132 C160
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0046872 metal ion binding
Biological Process
GO:0006351 DNA-templated transcription
GO:0006366 transcription by RNA polymerase II
GO:0006368 transcription elongation by RNA polymerase II
GO:0045944 positive regulation of transcription by RNA polymerase II
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005669 transcription factor TFIID complex
GO:0005730 nucleolus

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Molecular Function
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Cellular Component
External links
PDB RCSB:5iya, PDBe:5iya, PDBj:5iya
PDBsum5iya
PubMed27193682
UniProtP23193|TCEA1_HUMAN Transcription elongation factor A protein 1 (Gene Name=TCEA1)

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