Structure of PDB 3pip Chain U

Receptor sequence
>3pipU (length=72) Species: 1299 (Deinococcus radiodurans) [Search protein sequence]
TGKKNLVVNSVIRRGKARADGGVGRKTTGITKRVQRANLHKKAIRENGQV
KTVWLSANALRTLSKGPYKGIE
3D structure
PDB3pip Crystal structure of the synergistic antibiotic pair, lankamycin and lankacidin, in complex with the large ribosomal subunit.
ChainU
Resolution3.45 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna U N16 V18 I19 R20 R21 R32 T35 I37 T38 K39 V41 Q42 R43 A44 N45 L46 H47 K48 K49 I51 R68 N9 V11 I12 R13 R14 R25 T28 I30 T31 K32 V34 Q35 R36 A37 N38 L39 H40 K41 K42 I44 R61
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:3pip, PDBe:3pip, PDBj:3pip
PDBsum3pip
PubMed21282615
UniProtQ9RRG8|RL28_DEIRA Large ribosomal subunit protein bL28 (Gene Name=rpmB)

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