Structure of PDB 3j80 Chain U

Receptor sequence
>3j80U (length=106) Species: 28985 (Kluyveromyces lactis) [Search protein sequence]
QEVVIHKIRINLTSTKVKQLENVSANIIKNAETFKLVKKGPVRLPTKVLK
ISTRKTPNGEGSKTWDTYEMRIHKRYIDLEAPAHIVKRITQITIEPGVDV
EVIIAA
3D structure
PDB3j80 Structural changes enable start codon recognition by the eukaryotic translation initiation complex.
ChainU
Resolution3.75 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 rna U R23 K53 G54 V56 R57 L58 P59 T60 K61 S66 K69 T70 P71 N72 G73 E74 S76 K77 T78 K88 Y90 R9 K39 G40 V42 R43 L44 P45 T46 K47 S52 K55 T56 P57 N58 G59 E60 S62 K63 T64 K74 Y76
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:3j80, PDBe:3j80, PDBj:3j80
PDBsum3j80
PubMed25417110
UniProtQ6CIM1

[Back to BioLiP]