Structure of PDB 7ls1 Chain T3

Receptor sequence
>7ls1T3 (length=55) Species: 10090 (Mus musculus) [Search protein sequence]
SLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKG
PNANS
3D structure
PDB7ls1 Functionally distinct roles for eEF2K in the control of ribosome availability and p-body abundance.
ChainT3
Resolution3.3 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna T3 R8 A9 K11 V12 T16 V19 K21 Q22 K24 K25 K26 K28 T29 R31 A32 K33 R34 R35 N39 R41 N44 P55 N56 A57 N58 R4 A5 K7 V8 T12 V15 K17 Q18 K20 K21 K22 K24 T25 R27 A28 K29 R30 R31 N35 R37 N40 P51 N52 A53 N54
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0002227 innate immune response in mucosa
GO:0006412 translation
GO:0019731 antibacterial humoral response
GO:0050830 defense response to Gram-positive bacterium
GO:0061844 antimicrobial humoral immune response mediated by antimicrobial peptide
Cellular Component
GO:0005615 extracellular space
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022626 cytosolic ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:7ls1, PDBe:7ls1, PDBj:7ls1
PDBsum7ls1
PubMed34815424
UniProtP62862|RS30_MOUSE Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein (Gene Name=Fau)

[Back to BioLiP]