Structure of PDB 8s8j Chain T

Receptor sequence

>8s8jT (length=143) Species: 284590 (Kluyveromyces lactis NRRL Y-1140) [Search protein sequence]

PGVSVRDVPAQDFINNYASFLQRQGKLEVPGYVDIVKTSAGNELPPQDSE
GWFYKRAASVARHIYLRKQVGVGKLNKLYGGAKNRGVRPHKHVDASGSIN
RKVLQSLEKLGVVEISPKGGRRISDNGLRDLDRIAAATLEDEE

3D structure

PDB

8s8j Structural basis of AUC codon discrimination during translation initiation in yeast.

Chain

Resolution

4.7 Å

3D
structure

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	T	P2 G3 R7 A11 Q12 Y33 V37 A41 N43 L45 P46 P47 Q48 K56 R57 S60 R63 H64 R68 K69 G72 V73 G74 K75 K78 L79 Y80 N85 R86 G87 V88 R89 P90 H91 H93 S97 G98 S99 R102 Q106 K119 G121 R122 D126 L129 R130 D133	P1 G2 R6 A10 Q11 Y32 V36 A40 N42 L44 P45 P46 Q47 K55 R56 S59 R62 H63 R67 K68 G71 V72 G73 K74 K77 L78 Y79 N84 R85 G86 V87 R88 P89 H90 H92 S96 G97 S98 R101 Q105 K118 G120 R121 D125 L128 R129 D132

External links