Structure of PDB 7sym Chain T

Receptor sequence
>7symT (length=144) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]
SLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADID
LTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLAN
GLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRT
3D structure
PDB7sym Comprehensive structural overview of the HCV IRES-mediated translation initiation pathway
ChainT
Resolution4.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna T K25 F28 K34 G35 G37 R38 R39 Y40 W82 N85 Q87 H120 L129 R130 V131 R132 G133 Q134 H135 T136 K137 T139 R141 R142 R144 T145 K24 F27 K33 G34 G36 R37 R38 Y39 W81 N84 Q86 H119 L128 R129 V130 R131 G132 Q133 H134 T135 K136 T138 R140 R141 R143 T144
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:0022626 cytosolic ribosome
GO:1990904 ribonucleoprotein complex

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Biological Process
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Cellular Component
External links
PDB RCSB:7sym, PDBe:7sym, PDBj:7sym
PDBsum7sym
PubMed
UniProtG1TPG3|RS18_RABIT Small ribosomal subunit protein uS13 (Gene Name=RPS18)

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