Structure of PDB 7syh Chain T

Receptor sequence

>7syhT (length=144) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]

SLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADID
LTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLAN
GLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRT

3D structure

PDB

7syh Molecular architecture of 40S initiation complexes on the Hepatitis C virus IRES: from ribosomal attachment to eIF5B-mediated reorientation of initiator tRNA

Chain

Resolution

4.6 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	T	R24 K25 F28 G35 V36 G37 R39 Y40 W82 N85 R86 Q87 H120 R121 R124 H125 R130 V131 R132 G133 Q134 H135 T136 K137 R141 R142 R144 T145	R23 K24 F27 G34 V35 G36 R38 Y39 W81 N84 R85 Q86 H119 R120 R123 H124 R129 V130 R131 G132 Q133 H134 T135 K136 R140 R141 R143 T144

Gene Ontology

	Molecular Function
GO:0003676	nucleic acid binding
GO:0003723	RNA binding
GO:0003735	structural constituent of ribosome
GO:0019843	rRNA binding

	Biological Process
GO:0006412	translation

	Cellular Component
GO:0005737	cytoplasm
GO:0005829	cytosol
GO:0005840	ribosome
GO:0015935	small ribosomal subunit
GO:0022626	cytosolic ribosome
GO:1990904	ribonucleoprotein complex

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Molecular Function

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Cellular Component

External links

PDB	RCSB:7syh, PDBe:7syh, PDBj:7syh
PDBsum	7syh
PubMed
UniProt	G1TPG3\|RS18_RABIT Small ribosomal subunit protein uS13 (Gene Name=RPS18)

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