Structure of PDB 6g4s Chain T

Receptor sequence
>6g4sT (length=144) Species: 9606 (Homo sapiens) [Search protein sequence]
PGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDEN
WFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVAR
RVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAANKKH
3D structure
PDB6g4s Visualizing late states of human 40S ribosomal subunit maturation.
ChainT
Resolution4.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna T Q12 E44 L45 A46 P47 G71 V72 S74 R82 G86 V87 F92 G119 Q11 E43 L44 A45 P46 G70 V71 S73 R81 G85 V86 F91 G118
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0017134 fibroblast growth factor binding
GO:0019901 protein kinase binding
GO:0042802 identical protein binding
Biological Process
GO:0000028 ribosomal small subunit assembly
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0002181 cytoplasmic translation
GO:0002548 monocyte chemotaxis
GO:0006364 rRNA processing
GO:0006412 translation
GO:0007000 nucleolus organization
GO:0030218 erythrocyte differentiation
GO:0030490 maturation of SSU-rRNA
GO:0031640 killing of cells of another organism
GO:0042274 ribosomal small subunit biogenesis
GO:0050829 defense response to Gram-negative bacterium
GO:0060265 positive regulation of respiratory burst involved in inflammatory response
GO:0060266 negative regulation of respiratory burst involved in inflammatory response
GO:0061844 antimicrobial humoral immune response mediated by antimicrobial peptide
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005730 nucleolus
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0005925 focal adhesion
GO:0014069 postsynaptic density
GO:0016020 membrane
GO:0022626 cytosolic ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:0032040 small-subunit processome
GO:0070062 extracellular exosome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6g4s, PDBe:6g4s, PDBj:6g4s
PDBsum6g4s
PubMed29875412
UniProtP39019|RS19_HUMAN Small ribosomal subunit protein eS19 (Gene Name=RPS19)

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