Structure of PDB 7zjw Chain Se

Receptor sequence

>7zjwSe (length=143) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]

PGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDEN
WFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVAR
RVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAANKK

3D structure

PDB

7zjw Structure of the mammalian ribosome as it decodes the selenocysteine UGA codon.

Chain

Resolution

2.8 Å

3D
structure

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	Se	P2 G3 K7 Q12 V15 K38 L39 K41 K43 E44 L45 P47 Y48 R56 S59 R62 H63 X67 G71 V72 G73 S74 K77 I78 G80 R82 R84 G86 V87 M88 P89 S90 H91 F92 S96 K97 S98 R101 R102 Q105 G120 R121 P125 Q128 R129 D132 R133	P1 G2 K6 Q11 V14 K37 L38 K40 K42 E43 L44 P46 Y47 R55 S58 R61 H62 X66 G70 V71 G72 S73 K76 I77 G79 R81 R83 G85 V86 M87 P88 S89 H90 F91 S95 K96 S97 R100 R101 Q104 G119 R120 P124 Q127 R128 D131 R132

Gene Ontology

	Molecular Function
GO:0003723	RNA binding
GO:0003735	structural constituent of ribosome

	Biological Process
GO:0000028	ribosomal small subunit assembly
GO:0006412	translation

	Cellular Component
GO:0005840	ribosome
GO:0022627	cytosolic small ribosomal subunit
GO:1990904	ribonucleoprotein complex

External links