Structure of PDB 7zjx Chain Sd

Receptor sequence

>7zjxSd (length=141) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]

SLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADID
LTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLAN
GLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRR

3D structure

PDB

7zjx Structure of the mammalian ribosome as it decodes the selenocysteine UGA codon.

Chain

Resolution

3.1 Å

3D
structure

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	Sd	R24 K25 F28 K34 G35 V36 G37 R38 R39 Y40 R55 W82 F83 N85 R86 Q87 Q97 H120 R121 R124 H125 L129 R130 V131 R132 G133 Q134 H135 T136 K137 T138 T139 R141 R142	R23 K24 F27 K33 G34 V35 G36 R37 R38 Y39 R54 W81 F82 N84 R85 Q86 Q96 H119 R120 R123 H124 L128 R129 V130 R131 G132 Q133 H134 T135 K136 T137 T138 R140 R141

Gene Ontology

	Molecular Function
GO:0003676	nucleic acid binding
GO:0003723	RNA binding
GO:0003735	structural constituent of ribosome

	Biological Process
GO:0006412	translation

External links