Structure of PDB 8k2a Chain Sb

Receptor sequence
>8k2aSb (length=173) Species: 9606 (Homo sapiens) [Search protein sequence]
RKTRHDPLAKSKIERVNMPPAVDPAEFFVLMERYQHYRQTVRALRMEFVS
EVQRKVHEARAGVLAERKALKDAAEHRELMAWNQAENRRLHELRIARLRQ
EEREQEQRQALEQARKAEEVQAWAQRKEREVLQLQEEVKNFITRENLEAR
VEAALDSRKNYNWAITREGLVVR
3D structure
PDB8k2a Structural basis for differential inhibition of eukaryotic ribosomes by tigecycline.
ChainSb
Resolution2.9 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Sb R27 K28 T29 R30 K38 R41 P46 F53 Y60 R64 R71 Q79 R1 K2 T3 R4 K12 R15 P20 F27 Y34 R38 R45 Q53
Gene Ontology
Biological Process
GO:0032543 mitochondrial translation
Cellular Component
GO:0005654 nucleoplasm
GO:0005739 mitochondrion
GO:0005743 mitochondrial inner membrane
GO:0005763 mitochondrial small ribosomal subunit
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8k2a, PDBe:8k2a, PDBj:8k2a
PDBsum8k2a
PubMed38942792
UniProtQ9BYN8|RT26_HUMAN Small ribosomal subunit protein mS26 (Gene Name=MRPS26)

[Back to BioLiP]