Structure of PDB 6t7i Chain Sa

Receptor sequence
>6t7iSa (length=97) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
PKKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVR
DLSEASVYPEYALPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPP
3D structure
PDB6t7i Molecular mechanism of translational stalling by inhibitory codon combinations and poly(A) tracts.
ChainSa
Resolution3.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Sa P2 K3 K4 R5 A6 N8 G9 R10 N11 K12 K13 G14 R15 G16 H17 K32 K34 K37 R38 K70 S76 I79 R82 V84 R85 R87 S88 R89 R92 K93 R95 P1 K2 K3 R4 A5 N7 G8 R9 N10 K11 K12 G13 R14 G15 H16 K31 K33 K36 R37 K69 S75 I78 R81 V83 R84 R86 S87 R88 R91 K92 R94
BS02 rna Sa R42 H80 R41 H79
Gene Ontology
Molecular Function
GO:0003729 mRNA binding
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0008270 zinc ion binding
Biological Process
GO:0000054 ribosomal subunit export from nucleus
GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0002181 cytoplasmic translation
GO:0006412 translation
GO:0042255 ribosome assembly
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:0030686 90S preribosome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:6t7i, PDBe:6t7i, PDBj:6t7i
PDBsum6t7i
PubMed31858614
UniProtP39938|RS26A_YEAST Small ribosomal subunit protein eS26A (Gene Name=RPS26A)

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