Structure of PDB 8fky Chain SZ

Receptor sequence
>8fkySZ (length=160) Species: 9606 (Homo sapiens) [Search protein sequence]
PKAKGKTRRQKFGYSVNRKRLNRNARRKAAPRIECSHIRHAWDHAKSVRQ
NLAEMGLAVDPNRAVPLRLVRKPYVLNDLEAEASLPEKKGNTLSRDLIDY
VRYMVENHGEDYKAMARDEKNYYQDTPKQIRSKINVYKRFYPAEWQDFLD
SLQKRKMEVE
3D structure
PDB8fky Principles of human pre-60 S biogenesis.
ChainSZ
Resolution2.67 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna SZ P2 K3 K5 K7 R9 F13 R19 K20 R21 R27 R28 A31 H45 A46 S48 K107 N109 S112 D114 T144 K146 Q147 V154 R157 F158 P1 K2 K4 K6 R8 F12 R18 K19 R20 R26 R27 A30 H44 A45 S47 K89 N91 S94 D96 T126 K128 Q129 V136 R139 F140
Gene Ontology
Biological Process
GO:0042273 ribosomal large subunit biogenesis
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005730 nucleolus
GO:0043231 intracellular membrane-bounded organelle

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8fky, PDBe:8fky, PDBj:8fky
PDBsum8fky
PubMed37410842
UniProtQ9Y3C1|NOP16_HUMAN Nucleolar protein 16 (Gene Name=NOP16)

[Back to BioLiP]