Structure of PDB 8p5d Chain SW0

Receptor sequence
>8p5dSW0 (length=128) Species: 1358809 (Spraguea lophii 42_110) [Search protein sequence]
MMDKLANLCITINNANRAQKRSVVIRRISKVCRLFLESMQKHGYITDIVY
IDDHREGKAVVGLSGRLNRCGAICPRYDVELKDVERYRANLLPSRGFGHL
IVTSSKGLIDHRECIQHNTGGKILGYFY
3D structure
PDB8p5d Spraguea lophii ribosome
ChainSW0
Resolution10.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna SW0 M2 K4 I10 N14 R26 R55 E56 C74 R76 D78 L81 R86 T103 S104 S105 N118 G120 M2 K4 I10 N14 R26 R55 E56 C74 R76 D78 L81 R86 T103 S104 S105 N118 G120
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8p5d, PDBe:8p5d, PDBj:8p5d
PDBsum8p5d
PubMed37709902
UniProtS7XK92

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