Structure of PDB 8rxh Chain SV

Receptor sequence
>8rxhSV (length=122) Species: 347515 (Leishmania major strain Friedlin) [Search protein sequence]
GKIRTKTVKRASRQVVEKYYSKLNFDFYQNKRVIMDVTIAESKKLKNKIA
GYTTHIMKRLARGPVRGISLKLQEEERERRMDHAPATSDVDKVIQSGVSV
DKKTMQMLQRLEIGVPRRVKRA
3D structure
PDB8rxh Structural and mechanistic insights into the function of Leishmania ribosome lacking a single pseudouridine modification.
ChainSV
Resolution2.93 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 rna SV G2 K3 I4 R5 T6 K7 K10 F28 Y29 K32 S43 K44 K45 N48 K49 Y53 H56 K59 R60 R63 R67 G1 K2 I3 R4 T5 K6 K9 F27 Y28 K31 S42 K43 K44 N47 K48 Y52 H55 K58 R59 R62 R66
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:8rxh, PDBe:8rxh, PDBj:8rxh
PDBsum8rxh
PubMed38722744
UniProtQ4Q806

[Back to BioLiP]