Structure of PDB 8oo0 Chain SQ

Receptor sequence
>8oo0SQ (length=138) Species: 209285 (Thermochaetoides thermophila) [Search protein sequence]
SVQAVQVFGKKKNATAVARCVQGKGLIKVNGKPLKLFAPEILRAKLYEPI
LILGTDKFADVDIRIRVAGGGHTSQVYAVRQAIAKSIVAYYAKYVDEHSK
NLLKQELIQFDRSLLVADPRRCEPKKFGGRGARARFQK
3D structure
PDB8oo0 Methionine aminopeptidase 2 and its autoproteolysis product have different binding sites on the ribosome.
ChainSQ
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna SQ Q8 F10 K14 N15 K30 E42 R66 R68 G71 G72 G73 H74 S76 Q77 R122 R123 P126 K127 K128 G131 R132 R137 F138 K140 Q6 F8 K12 N13 K28 E40 R64 R66 G69 G70 G71 H72 S74 Q75 R120 R121 P124 K125 K126 G129 R130 R135 F136 K138
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:8oo0, PDBe:8oo0, PDBj:8oo0
PDBsum8oo0
PubMed38267453
UniProtG0SBR7

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