Structure of PDB 7qvp Chain SQ

Receptor sequence

>7qvpSQ (length=142) Species: 9606 (Homo sapiens) [Search protein sequence]

GPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEP
VLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEAS
KKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR

3D structure

PDB

7qvp A distinct mammalian disome collision interface harbors K63-linked polyubiquitination of uS10 to trigger hRQT-mediated subunit dissociation.

Chain

Resolution

3.0 Å

3D
structure

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	SQ	Q11 V12 F13 R15 K16 K17 T18 K33 P44 R69 R71 K73 G74 G75 G76 H77 V78 A79 Q80 P124 R125 R126 C127 E128 S129 K130 K131 F132 A137 R138 A139 R140 Y141 Q142 K143 S144 Y145 R146	Q7 V8 F9 R11 K12 K13 T14 K29 P40 R65 R67 K69 G70 G71 G72 H73 V74 A75 Q76 P120 R121 R122 C123 E124 S125 K126 K127 F128 A133 R134 A135 R136 Y137 Q138 K139 S140 Y141 R142

Gene Ontology

	Molecular Function
GO:0003723	RNA binding
GO:0003735	structural constituent of ribosome

	Biological Process
GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0006412	translation

	Cellular Component
GO:0005840	ribosome
GO:0022627	cytosolic small ribosomal subunit
GO:1990904	ribonucleoprotein complex

External links