Structure of PDB 8fkt Chain SN

Receptor sequence
>8fktSN (length=173) Species: 9606 (Homo sapiens) [Search protein sequence]
TDRELQDAFSRGLLKPGLNVVLEGPKKAVNDVNGLKQCLAEFKRDLEWVE
RLDVTLGPVPDDFQREMSFYRQAQAAVLAVLPRLHQLKVPTKRPTDYFAE
MAKSDLQMQKIRQKLQTKQAAMERSEKAKQLRALRKYGKKVQTEVLQKRQ
QEKAHMMNAIKKYQKGFSDKLDF
3D structure
PDB8fkt Principles of human pre-60 S biogenesis.
ChainSN
Resolution2.81 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna SN K153 K157 R171 L173 R174 Q181 R188 K114 K118 R132 L134 R135 Q142 R149
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0005515 protein binding
Biological Process
GO:0006364 rRNA processing
GO:0042254 ribosome biogenesis
GO:0042273 ribosomal large subunit biogenesis
Cellular Component
GO:0005634 nucleus
GO:0005694 chromosome
GO:0005730 nucleolus
GO:0030687 preribosome, large subunit precursor
GO:0034399 nuclear periphery

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8fkt, PDBe:8fkt, PDBj:8fkt
PDBsum8fkt
PubMed37410842
UniProtQ99848|EBP2_HUMAN Probable rRNA-processing protein EBP2 (Gene Name=EBNA1BP2)

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