Structure of PDB 7zjw Chain SL

Receptor sequence
>7zjwSL (length=221) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]
SGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINL
KRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAG
RFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTD
SPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDL
YFYRDPEEIEKEEQAAAEKAV
3D structure
PDB7zjw Structure of the mammalian ribosome as it decodes the selenocysteine UGA codon.
ChainSL
Resolution2.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna SL F32 R102 P105 T109 N110 I112 Q113 Q132 E136 Y139 R155 F31 R101 P104 T108 N109 I111 Q112 Q131 E135 Y138 R154
Gene Ontology
Molecular Function
GO:0001618 virus receptor activity
GO:0003735 structural constituent of ribosome
GO:0005055 laminin receptor activity
GO:0043236 laminin binding
Biological Process
GO:0000028 ribosomal small subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
GO:0007155 cell adhesion
GO:0046718 symbiont entry into host cell
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0005886 plasma membrane
GO:0015935 small ribosomal subunit
GO:0022627 cytosolic small ribosomal subunit
GO:0030686 90S preribosome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:7zjw, PDBe:7zjw, PDBj:7zjw
PDBsum7zjw
PubMed35709277
UniProtG1TLT8|RSSA_RABIT Small ribosomal subunit protein uS2 (Gene Name=RPSA)

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