Structure of PDB 8fkz Chain SI

Receptor sequence
>8fkzSI (length=233) Species: 9606 (Homo sapiens) [Search protein sequence]
LVPENLLKKRKAYQALKATQAKQALLAKKEQKKGRFKRLESFLHDSWRQK
RDKVRLRRLEVKPHALELPDKHSLAFVVRIERIDGVSLLVQRTIARLRLK
KIFSGVFVKVTPQNLKMLRIVEPYVTWGFPNLKSVRELILKRGQAKVKNK
TIPLTDNTVIEEHLGKFGVICLEDLIHEIAFPGKHFQEISWFLCPFHLSV
ARHATKNRVGFLKEMGTPGYRGERINQLIRQLN
3D structure
PDB8fkz Principles of human pre-60 S biogenesis.
ChainSI
Resolution3.04 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna SI L65 H66 W69 K72 R80 P85 H86 R230 L43 H44 W47 K50 R58 P63 H64 R208
BS02 rna SI Q39 Q42 K47 K48 K51 A223 R224 H225 Q20 Q23 K28 K29 K32 A201 R202 H203
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
Biological Process
GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0001825 blastocyst formation
Cellular Component
GO:0005730 nucleolus
GO:0005739 mitochondrion
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:8fkz, PDBe:8fkz, PDBj:8fkz
PDBsum8fkz
PubMed37410842
UniProtQ6DKI1|RL7L_HUMAN Ribosomal protein uL30-like (Gene Name=RPL7L1)

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