Structure of PDB 8fkt Chain SI

Receptor sequence
>8fktSI (length=228) Species: 9606 (Homo sapiens) [Search protein sequence]
IPLVPENLLKKRKAYQALKATQAKQALLARFKRLESFLHDSWRQKRDKVR
LRRLEVKPHALELPDKHSLAFVVRIERIDGVSLLVQRTIARLRLKKIFSG
VFVKVTPQNLKMLRIVEPYVTWGFPNLKSVRELILKRGQAKVKNKTIPLT
DNTVIEEHLGKFGVICLEDLIHEIAFPGKHFQEISWFLCPFHLSVARHAT
KNRVGFLKEMGTPGYRGERINQLIRQLN
3D structure
PDB8fkt Principles of human pre-60 S biogenesis.
ChainSI
Resolution2.81 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna SI R57 F58 S63 R30 F31 S36
BS02 rna SI L65 H66 W69 K72 R73 V76 R80 K84 P85 H86 R104 D106 R230 L38 H39 W42 K45 R46 V49 R53 K57 P58 H59 R77 D79 R203
BS03 rna SI Y32 K36 A223 R224 H225 Y15 K19 A196 R197 H198
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
Biological Process
GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0001825 blastocyst formation
Cellular Component
GO:0005730 nucleolus
GO:0005739 mitochondrion
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8fkt, PDBe:8fkt, PDBj:8fkt
PDBsum8fkt
PubMed37410842
UniProtQ6DKI1|RL7L_HUMAN Ribosomal protein uL30-like (Gene Name=RPL7L1)

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