Structure of PDB 8oo0 Chain SF

Receptor sequence
>8oo0SF (length=199) Species: 209285 (Thermochaetoides thermophila) [Search protein sequence]
DVLPKEVLAEVGSVKLFNRWSYDDIEIRDISLTDYIQIRAPVYIPHSAGR
YAVKRFRKANCPIIERLTNSLMMHGRNNGKKLMAVRIVAHAFEIIHLMTD
QNPIQVAVDAIVNCGPREDSTRIGSAGTVRRQAVDVSPLRRVNQAIALLT
TGAREAAFRNVKTIAECLAEELINAAKGSSNSYAIKKKDELERVAKSNR
3D structure
PDB8oo0 Methionine aminopeptidase 2 and its autoproteolysis product have different binding sites on the ribosome.
ChainSF
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna SF H59 A65 R68 K71 R79 L84 H87 R89 N90 N91 G92 K93 R153 N156 F171 R172 V174 I177 H46 A52 R55 K58 R66 L71 H74 R76 N77 N78 G79 K80 R140 N143 F158 R159 V161 I164
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003729 mRNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0000028 ribosomal small subunit assembly
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Biological Process
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Cellular Component
External links
PDB RCSB:8oo0, PDBe:8oo0, PDBj:8oo0
PDBsum8oo0
PubMed38267453
UniProtG0S1Z0

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