Structure of PDB 7d5t Chain SF

Receptor sequence
>7d5tSF (length=247) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]
LKRLAAPHHWLLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNG
REVKAILMQRHVKVDGKVRTDTTYPAGFMDVITLDATNENFRLVYDVKGR
FAVHRITDEEASYKLGKVKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVND
TVKIDLASGKITDFIKFDAGKLVYVTGGRNLGRIGTIVHKERHDGGFDLV
HIKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIKLSIAEERDRR
3D structure
PDB7d5t Cryo-EM structure of 90S preribosome with inactive Utp24 (state F1)
ChainSF
Resolution6.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna SF A13 H16 S24 Y27 P29 R30 A33 G34 K37 R49 N57 G58 M66 K75 R77 K128 L131 K133 K134 T146 R148 K155 R187 D202 V219 T220 R221 I248 A5 H8 S16 Y19 P21 R22 A25 G26 K29 R41 N49 G50 M58 K67 R69 K120 L123 K125 K126 T138 R140 K147 R179 D194 V211 T212 R213 I240
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:0030686 90S preribosome
GO:0032991 protein-containing complex
GO:0043232 intracellular non-membrane-bounded organelle
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7d5t, PDBe:7d5t, PDBj:7d5t
PDBsum7d5t
PubMed
UniProtP0CX35|RS4A_YEAST Small ribosomal subunit protein eS4A (Gene Name=RPS4A)

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