Structure of PDB 8oo0 Chain SD

Receptor sequence
>8oo0SD (length=214) Species: 209285 (Thermochaetoides thermophila) [Search protein sequence]
QISKKRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRAT
HTQEVLGEQGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCE
SLRYKLLNGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRAARAKSMKFT
DGFMIHSGQPAREFIDTATRHVLLRQGVLGIKVKIMRGKTLPDVVTVIEP
KEETPVVQPMSQDY
3D structure
PDB8oo0 Methionine aminopeptidase 2 and its autoproteolysis product have different binding sites on the ribosome.
ChainSD
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna SD Q7 I8 S9 K10 K11 R12 K144 R146 R149 F159 H162 S163 G164 Q165 H177 Q182 V184 D209 Q1 I2 S3 K4 K5 R6 K138 R140 R143 F153 H156 S157 G158 Q159 H171 Q176 V178 D193
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005634 nucleus
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:0022626 cytosolic ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:8oo0, PDBe:8oo0, PDBj:8oo0
PDBsum8oo0
PubMed38267453
UniProtG0S6I7

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