Structure of PDB 8oo0 Chain SC

Receptor sequence
>8oo0SC (length=216) Species: 209285 (Thermochaetoides thermophila) [Search protein sequence]
EKEWQPVTKLGRLVKAGKIKSMEEIYLHSLPIKEYQIVDYFLPKLKDEVM
KIKPVQKQTRAGQRTRFKAIVLIGDSDGHVGLGIKTSKEVATAIRAAIII
AKLSVIPVRRGYWGANLGRPHSLPVKQSGKCGSVTVRLIPAPRGTSLVAS
PAVKRLLQLAGIEDAYTSSSGSTKTLENTLKATFAAVANTYGFLTPNLWK
ETKLIRSPLEEYADTL
3D structure
PDB8oo0 Methionine aminopeptidase 2 and its autoproteolysis product have different binding sites on the ribosome.
ChainSC
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna SC Q95 Q97 K127 S167 K169 S172 R176 V187 Y205 T206 S208 K213 T214 N217 K220 Q56 Q58 K88 S128 K130 S133 R137 V148 Y166 T167 S169 K174 T175 N178 K181
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8oo0, PDBe:8oo0, PDBj:8oo0
PDBsum8oo0
PubMed38267453
UniProtG0SAV4

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