Structure of PDB 8oo0 Chain SB

Receptor sequence
>8oo0SB (length=232) Species: 209285 (Thermochaetoides thermophila) [Search protein sequence]
VGKNKRLSKGKKGLKKKVQDPFTRKDWYNIKAPAPFAVRDVGKTLVNRTT
GLKNANDALKGRIFEVCLADLQKDEDHAFRKIKLRVDEVQGKNCLTNFHG
LDFTTDKLRSLVRKWQTLIEANVTVTTTDHYLLRLFAIAFTKRRPNQIKK
TTYAQSSQIRAIRRKMVEIIQREAASCTLHQLVSKLIPEVIGREIEKATQ
GIYPLQNVHIRKVKLLKQPKFDLGALMALHGE
3D structure
PDB8oo0 Methionine aminopeptidase 2 and its autoproteolysis product have different binding sites on the ribosome.
ChainSB
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna SB K7 L9 K11 K13 K17 K18 R115 K116 W117 Q118 R136 R146 N148 K151 Y155 Q157 S158 S159 K199 G203 Y205 K216 K5 L7 K9 K11 K15 K16 R113 K114 W115 Q116 R134 R144 N146 K149 Y153 Q155 S156 S157 K197 G201 Y203 K214
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8oo0, PDBe:8oo0, PDBj:8oo0
PDBsum8oo0
PubMed38267453
UniProtG0S7T8

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