Structure of PDB 8p5d Chain SA0

Receptor sequence
>8p5dSA0 (length=220) Species: 1358809 (Spraguea lophii 42_110) [Search protein sequence]
AVRVVPLSDKVAKAMVQCCCHLGGVTSSTSLKEYIFGKREEDKVNIIDIK
KMWEKLNLAARMICSIPNPKDIVVVSSKDFGRKAVIKFAESIGATAVTGR
FIPGSFSNYEIKGVREPRLVLVSDCFADKQVVKEASYVNAPCIAFCNTDN
DIEFVDMVIPMNNRSQSAIGAGFCILSKLVNYMKGNIDKVEDKLRDHIEL
YTYRDSDELEQLYQEQKIEE
3D structure
PDB8p5d Spraguea lophii ribosome
ChainSA0
Resolution10.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna SA0 P105 G106 S109 Y111 Q132 P103 G104 S107 Y109 Q130
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000028 ribosomal small subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:0022627 cytosolic small ribosomal subunit
GO:0030686 90S preribosome

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Molecular Function
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Cellular Component
External links
PDB RCSB:8p5d, PDBe:8p5d, PDBj:8p5d
PDBsum8p5d
PubMed37709902
UniProtS7W8R1

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