Structure of PDB 3j6y Chain S7

Receptor sequence
>3j6yS7 (length=184) Species: 580240 (Saccharomyces cerevisiae W303) [Search protein sequence]
PQAKILSQAPTELELQVAQAFVELENSSPELKAELRPLQFKSIREIDVAG
GKKALAIFVPVPSLAGFHKVQTKLTRELEKKFQDRHVIFLAERRILPKPS
RTSRQVQKRPRSRTLTAVHDKILEDLVFPTEIVGKRVRYLVGGNKIQKVL
LDSKDVQQIDYKLESFQAVYNKLTGKQIVFEIPS
3D structure
PDB3j6y Taura syndrome virus IRES initiates translation by binding its tRNA-mRNA-like structural element in the ribosomal decoding center.
ChainS7
Resolution6.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna S7 R96 I98 L99 K101 R104 T105 S106 R107 Q108 Q110 K111 R114 R116 L118 T119 T177 K179 R93 I95 L96 K98 R101 T102 S103 R104 Q105 Q107 K108 R111 R113 L115 T116 T174 K176
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0002181 cytoplasmic translation
GO:0006364 rRNA processing
GO:0006412 translation
GO:0042254 ribosome biogenesis
GO:0042274 ribosomal small subunit biogenesis
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005730 nucleolus
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:0030686 90S preribosome
GO:0032040 small-subunit processome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:3j6y, PDBe:3j6y, PDBj:3j6y
PDBsum3j6y
PubMed24927574
UniProtP26786|RS7A_YEAST Small ribosomal subunit protein eS7A (Gene Name=RPS7A)

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