Structure of PDB 8wq2 Chain S3AE

Receptor sequence
>8wq2S3AE (length=189) Species: 330779 (Sulfolobus acidocaldarius DSM 639) [Search protein sequence]
IRDKWKLKKWYVITAPKVFGEALLGSTPAYDINKALSRKIEVTLYDLTGD
YNLVYIHLYFKILGNISGDKLSTIFYGHELSRDYIRSLVRRKSSKINAVV
DVTTKDGYMLRVKGLVLTTYRAHISQKTAIRKVISDITRKKAEESDFDQF
VQDVIFGKLSNDIFQEAKKIYPLRKVEIEKTKLLKAPKV
3D structure
PDB8wq2 Structural basis of translation inhibition by a valine tRNA-derived fragment
ChainS3AE
Resolution4.1 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna S3AE V97 R99 K103 R119 Y128 R129 H131 I132 R139 K176 K177 I178 Y179 P180 V89 R91 K95 R111 Y120 R121 H123 I124 R131 K168 K169 I170 Y171 P172
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005829 cytosol
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8wq2, PDBe:8wq2, PDBj:8wq2
PDBsum8wq2
PubMed38599770
UniProtQ4JB17|RS3A_SULAC Small ribosomal subunit protein eS1 (Gene Name=rps3ae)

[Back to BioLiP]