Structure of PDB 8vsa Chain S15

Receptor sequence
>8vsaS15 (length=88) Species: 562 (Escherichia coli) [Search protein sequence]
SLSTEATAKIVSEFGRDANDTGSTEVQVALLTAQINHLQGHFAEHKKDHH
SRRGLLRMVSQRRKLLDYLKRKDVARYTQLIERLGLRR
3D structure
PDB8vsa Endogenous trans-translation structure visualizes the decoding of the first tmRNA alanine codon.
ChainS15
Resolution3.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna S15 Q39 V59 R88 Q39 V59 R88
BS02 rna S15 S1 T4 N19 D20 T21 G22 Q27 Q34 H41 H45 D48 H49 H50 S51 R53 M58 S60 K64 Y68 R71 S1 T4 N19 D20 T21 G22 Q27 Q34 H41 H45 D48 H49 H50 S51 R53 M58 S60 K64 Y68 R71
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0000028 ribosomal small subunit assembly
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:8vsa, PDBe:8vsa, PDBj:8vsa
PDBsum8vsa
PubMed38500588
UniProtC3SSQ7

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