Structure of PDB 8etg Chain S

Receptor sequence

>8etgS (length=174) Species: 4896 (Schizosaccharomyces pombe) [Search protein sequence]

ALKEYQVVGRKVPTEHEPVPKLFRMRLFAPNESVAKSRYWYFLKMINKVK
KATGEIVAINEISEPKPLKAKVFGIWIRYDSRSGTHNMYKEFRDTTRVGA
VEAMYADMAARHRARFRSIRILKVVEVEKKEDVRRNYVKQLLNPHLKFPL
PHRRTGVVGLAGKKVFAPHRPSTF

3D structure

PDB

8etg Chromatin localization of nucleophosmin organizes ribosome biogenesis.

Chain

Resolution

3.4 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	S	E62 I63 S64 P66 P68 K70 R83 R94 A110 A111 R112 R114 R116 R136 Y138 L143 N144 P145 H153 R154 K165 P169 H170 S173 T174 F175	E61 I62 S63 P65 P67 K69 R82 R93 A109 A110 R111 R113 R115 R135 Y137 L142 N143 P144 H152 R153 K164 P168 H169 S172 T173 F174
BS02	peptide	S	R11 P21 K22 L23 F24 R25 M26 V58 R121 L123	R10 P20 K21 L22 F23 R24 M25 V57 R120 L122

Gene Ontology

	Molecular Function
GO:0003735	structural constituent of ribosome

	Biological Process
GO:0002181	cytoplasmic translation
GO:0006412	translation

	Cellular Component
GO:0005737	cytoplasm
GO:0005829	cytosol
GO:0005840	ribosome
GO:0022625	cytosolic large ribosomal subunit
GO:1990904	ribonucleoprotein complex

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Molecular Function

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Biological Process

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Cellular Component

External links

PDB	RCSB:8etg, PDBe:8etg, PDBj:8etg
PDBsum	8etg
PubMed	36423630
UniProt	P0CT68\|RL20A_SCHPO Large ribosomal subunit protein eL20A (Gene Name=rpl2001)

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