Structure of PDB 6ny6 Chain S

Receptor sequence
>6ny6S (length=84) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
PRSLKKGVFVDDHLLEKVLELNAKGEKRLIKTWSRRSTIVPEMVGHTIAV
YNGKQHVPVYITENMVGHKLGEFAPTRTYRGHGK
3D structure
PDB6ny6 Monomeric YoeB toxin retains RNase activity but adopts an obligate dimeric form for thermal stability.
ChainS
Resolution3.74 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna S P2 R3 S4 L5 K6 V11 H14 W34 R36 R37 Y52 N53 G54 K55 K70 G72 E73 T77 R78 Y80 R81 H83 P1 R2 S3 L4 K5 V10 H13 W33 R35 R36 Y51 N52 G53 K54 K69 G71 E72 T76 R77 Y79 R80 H82
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0000028 ribosomal small subunit assembly
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:6ny6, PDBe:6ny6, PDBj:6ny6
PDBsum6ny6
PubMed31501867
UniProtQ5SHP2|RS19_THET8 Small ribosomal subunit protein uS19 (Gene Name=rpsS)

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