Structure of PDB 6j2n Chain S

Receptor sequence
>6j2nS (length=475) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]
LHHSEKKYAEEDQVQELLKVLNEISKTTLTLDPRYIWRSLKDLSSLRNQE
LLNAETLCFTVNVLYPDSSSFKKNLLKFITSNHKSSVPGSAELRNSYPAS
FYSVNTEKKTIEVTAEINCFMHLLVQLFLWDSKELEQLVEFNRKVVIPNL
LCYYNLRSLNLINAKLWFYIYLSHETLARSSEEINSDNQNIILRSTMMKF
LKIASLKHDNETKAMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSS
LEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNSKSLGFLQQSNKLH
CCIQLLMGDIPELSFFHQSNMQKSLLPYYHLTKAVKLGDLKKFTSTITKY
KQLLLKDDTYQLCVRLRSNVIKTGIRIISLTYKKISLRDICLKLNLDSEQ
TVEYMVSRAIRDGVIEAKINHEDGFIETTELLNIYDSEDPQQVFDERIKF
ANQLHDEYLVSMRYPEDKKTQQNEK
3D structure
PDB6j2n Structural Snapshots of 26S Proteasome Reveal Tetraubiquitin-Induced Conformations.
ChainS
Resolution7.5 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide S I327 E329 L330 S331 H334 Y346 K353 I310 E312 L313 S314 H317 Y329 K336
Gene Ontology
Molecular Function
GO:0003674 molecular_function
GO:0005515 protein binding
GO:0030234 enzyme regulator activity
Biological Process
GO:0006511 ubiquitin-dependent protein catabolic process
GO:0042176 regulation of protein catabolic process
GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
Cellular Component
GO:0000502 proteasome complex
GO:0008541 proteasome regulatory particle, lid subcomplex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6j2n, PDBe:6j2n, PDBj:6j2n
PDBsum6j2n
PubMed30792173
UniProtP40016|RPN3_YEAST 26S proteasome regulatory subunit RPN3 (Gene Name=RPN3)

[Back to BioLiP]