Structure of PDB 6gsm Chain S

Receptor sequence

>6gsmS (length=145) Species: 284590 (Kluyveromyces lactis NRRL Y-1140) [Search protein sequence]

SLVVQEQGSFQHILRLLNTNVDGNINVVYALTTIRGVGRRYANLVCKKAD
VDLHKRAGELTQEELERIVQIMQNPTHYKIPAWFLNRQKDVNDGKDYHSL
ANNLESKLRDDLERLKKIRSHRGIRHFWGLRVRGQHTKTTGRRRA

3D structure

PDB

6gsm Large-scale movement of eIF3 domains during translation initiation modulate start codon selection.

Chain

Resolution

5.15 Å

3D
structure

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	S	N27 Y30 R36 G37 V38 G39 R40 R41 Y42 W84 F85 N87 R88 Q89 L109 H122 R123 R126 H127 R132 V133 R134 G135 Q136 H137 T138 K139 T140 T141 R143 R144 R145	N26 Y29 R35 G36 V37 G38 R39 R40 Y41 W83 F84 N86 R87 Q88 L108 H121 R122 R125 H126 R131 V132 R133 G134 Q135 H136 T137 K138 T139 T140 R142 R143 R144

Gene Ontology

	Molecular Function
GO:0003676	nucleic acid binding
GO:0003723	RNA binding
GO:0003735	structural constituent of ribosome

	Biological Process
GO:0006412	translation

External links