Structure of PDB 5wvi Chain S

Receptor sequence
>5wviS (length=353) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]
KTIEVTAEINCFMHLLVQLFLWDSKELEQLVEFNRKVVIPNLLCYYNLRS
LNLINAKLWFYIYLSHETLARSSEEINSDNQNIILRSTMMKFLKIASLKH
DNETKAMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFY
LSKINAIQLDYSTANEYIIAAIRKAPHNSKSLGFLQQSNKLHCCIQLLMG
DIPELSFFHQSNMQKSLLPYYHLTKAVKLGDLKKFTSTITKYKQLLLKDD
TYQLCVRLRSNVIKTGIRIISLTYKKISLRDICLKLNLDSEQTVEYMVSR
AIRDGVIEAKINHEDGFIETTELLNIYDSEDPQQVFDERIKFANQLHDEY
LVS
3D structure
PDB5wvi High-resolution cryo-EM structure of the proteasome in complex with ADP-AlFx
ChainS
Resolution6.3 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide S D326 P328 T349 D201 P203 T224
Gene Ontology
Molecular Function
GO:0003674 molecular_function
GO:0005515 protein binding
GO:0030234 enzyme regulator activity
Biological Process
GO:0006511 ubiquitin-dependent protein catabolic process
GO:0042176 regulation of protein catabolic process
GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
Cellular Component
GO:0000502 proteasome complex
GO:0008541 proteasome regulatory particle, lid subcomplex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:5wvi, PDBe:5wvi, PDBj:5wvi
PDBsum5wvi
PubMed28106073
UniProtP40016|RPN3_YEAST 26S proteasome regulatory subunit RPN3 (Gene Name=RPN3)

[Back to BioLiP]