Structure of PDB 5w7g Chain S

Receptor sequence
>5w7gS (length=131) Species: 235266 (Captovirus AFV1) [Search protein sequence]
RKLRQDSTDRYKTKLYLWRNLGGLIPEDMAISVTESITADWKQYNDMMSK
VRNETLDILKTNKVATEDYIGYIAFAEELAHQVWKNKNSSPDPNTANEAS
KTDLESKYSDVYGLDVTVLDAIYNAVIPIIM
3D structure
PDB5w7g Model for a novel membrane envelope in a filamentous hyperthermophilic virus.
ChainS
Resolution4.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna S R15 Y16 W23 R24 S41 D45 Q48 Y49 I75 E82 H86 R10 Y11 W18 R19 S36 D40 Q43 Y44 I70 E77 H81
BS02 dna S L8 S12 R15 Y16 K19 Y49 M53 R57 T71 I75 K90 L3 S7 R10 Y11 K14 Y44 M48 R52 T66 I70 K85
Gene Ontology
Cellular Component
GO:0019029 helical viral capsid
GO:0044423 virion component

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:5w7g, PDBe:5w7g, PDBj:5w7g
PDBsum5w7g
PubMed28639939
UniProtQ70LC6|CAPS1_AFV1Y Major capsid protein 1 (Gene Name=ORF140)

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