Structure of PDB 5odv Chain S

Receptor sequence
>5odvS (length=207) Species: 146500 (Watermelon mosaic virus) [Search protein sequence]
PRLQKITKKMNLPTVGGKIILSLDHLLEYKPNQVDLFNTRATKTQFESWY
SAVKVEYDLNDEQMGVIMNGFMVWCIDNGTSPDVNGVWVMMDGEEQVEYP
LKPIVENAKPTLRQIMHHFSDAAEAYIEMRNSESPYMPRYGLLRNLRDRE
LARYAFDFYEVTSKTPNRAREAIAQMKAAALAGINSRLFGLDGNISTNSE
NTERHTA
3D structure
PDB5odv Potyvirus virion structure shows conserved protein fold and RNA binding site in ssRNA viruses.
ChainS
Resolution4.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna S G138 S140 D142 R172 Y199 R203 G79 S81 D83 R113 Y140 R144
Gene Ontology

View graph for
Cellular Component
External links
PDB RCSB:5odv, PDBe:5odv, PDBj:5odv
PDBsum5odv
PubMed28948231
UniProtQ70J31

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