Structure of PDB 5ef3 Chain S

Receptor sequence
>5ef3S (length=70) Species: 1422 (Geobacillus stearothermophilus) [Search protein sequence]
TNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSA
IKVRGKAYIQTRHGVIESEG
3D structure
PDB5ef3 RNA protects a nucleoprotein complex against radiation damage.
ChainS
Resolution1.98 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna S G18 F32 H34 S35 E36 K37 D39 R58 G14 F28 H30 S31 E32 K33 D35 R54
BS02 TRP S R26 G27 D29 T30 S53 R22 G23 D25 T26 S49
BS03 TRP S G23 A46 Q47 T49 G19 A42 Q43 T45
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0005515 protein binding
GO:0042802 identical protein binding
Biological Process
GO:0006353 DNA-templated transcription termination
GO:0006355 regulation of DNA-templated transcription

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Molecular Function
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Biological Process
External links
PDB RCSB:5ef3, PDBe:5ef3, PDBj:5ef3
PDBsum5ef3
PubMed27139628
UniProtQ9X6J6|MTRB_GEOSE Transcription attenuation protein MtrB (Gene Name=mtrB)

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