Structure of PDB 3g4s Chain S

Receptor sequence
>3g4sS (length=81) Species: 2238 (Haloarcula marismortui) [Search protein sequence]
SWDVIKHPHVTEKAMNDMDFQNKLQFAVDDRASKGEVADAVEEQYDVTVE
QVNTQNTMDGEKKAVVRLSEDDDAQEVASRI
3D structure
PDB3g4s U2504 determines the species specificity of the A-site cleft antibiotics: the structures of tiamulin, homoharringtonine, and bruceantin bound to the ribosome.
ChainS
Resolution3.2 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna S S1 H9 T11 K13 Q21 K23 R31 S33 K34 N53 T54 Q55 N56 M58 K62 K63 V65 S1 H9 T11 K13 Q21 K23 R31 S33 K34 N53 T54 Q55 N56 M58 K62 K63 V65
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:3g4s, PDBe:3g4s, PDBj:3g4s
PDBsum3g4s
PubMed19362093
UniProtP12732|RL23_HALMA Large ribosomal subunit protein uL23 (Gene Name=rpl23)

[Back to BioLiP]