Structure of PDB 1utd Chain S

Receptor sequence
>1utdS (length=70) Species: 1422 (Geobacillus stearothermophilus) [Search protein sequence]
TNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSA
IKVRGKAYIQTRHGVIESEG
3D structure
PDB1utd The Interaction of RNA with Trap: The Role of Triplet Repeats and Separating Spacer Nucleotides
ChainS
Resolution2.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna S G18 F32 E36 K37 D39 K56 G14 F28 E32 K33 D35 K52 PDBbind-CN: Kd=0.31nM
BS02 TRP S G27 T30 S53 G23 T26 S49
BS03 TRP S G23 Q47 T49 G19 Q43 T45
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0005515 protein binding
GO:0042802 identical protein binding
Biological Process
GO:0006353 DNA-templated transcription termination
GO:0006355 regulation of DNA-templated transcription

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Molecular Function
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Biological Process
External links
PDB RCSB:1utd, PDBe:1utd, PDBj:1utd
PDBsum1utd
PubMed15050822
UniProtQ9X6J6|MTRB_GEOSE Transcription attenuation protein MtrB (Gene Name=mtrB)

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