Structure of PDB 7d4i Chain RF

Receptor sequence
>7d4iRF (length=241) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]
IEDISAMKNGFIVVPFKLPDHKALPASLHFMFAKRHQSSNSNESDCLFLV
NLPLLSNIEHMKKFVGQLCGKYDTVSHVEELLYNDEFGLHEVDLSALTSD
LMSSPRNTALLKFVDAASINNCWNALKKYSNLHAKHPNELFEWTYTTPSF
TTFVNFYKPLDIDYLKEDIHTHMAIFEQREAQAQEDVQSSIVDEDGFTLV
VGKNTKSLNSIRKKILNKNKKAKKDFYRFQVRERKKQEINQ
3D structure
PDB7d4i Cryo-EM structure of 90S small ribosomal precursors complex with Dhr1
ChainRF
Resolution4.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna RF N219 K221 S225 K228 K229 N204 K206 S210 K213 K214
Gene Ontology
Molecular Function
GO:0005515 protein binding
GO:0019843 rRNA binding
Biological Process
GO:0000028 ribosomal small subunit assembly
GO:0006364 rRNA processing
GO:0030490 maturation of SSU-rRNA
GO:0042254 ribosome biogenesis
GO:0042790 nucleolar large rRNA transcription by RNA polymerase I
GO:0060962 regulation of ribosomal protein gene transcription by RNA polymerase II
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005730 nucleolus
GO:0032040 small-subunit processome
GO:0032545 CURI complex
GO:0034456 UTP-C complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7d4i, PDBe:7d4i, PDBj:7d4i
PDBsum7d4i
PubMed
UniProtP25368|RRP7_YEAST Ribosomal RNA-processing protein 7 (Gene Name=RRP7)

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