Structure of PDB 8p8n Chain RB
Receptor sequence
>8p8nRB (length=55) Species:
4932
(Saccharomyces cerevisiae) [
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AKSKNHTAHNQTRKAHRNGIKKPKTYKYPSLKGVDPKFRRNHKHALHGTA
KALAA
3D structure
PDB
8p8n
Real-space refinement in PHENIX for cryo-EM and crystallography.
Chain
RB
Resolution
2.15 Å
3D
structure
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Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
rna
RB
A2 K3 K5 N6 H7 T8 A9 H10 N11 Q12 T13 R14 K15 H17 K23 K25 T26 Y27 K28 Y29 K33 D36 P37 F39 R41 N42 H43 K44 H45 A46 L47 G49
A1 K2 K4 N5 H6 T7 A8 H9 N10 Q11 T12 R13 K14 H16 K22 K24 T25 Y26 K27 Y28 K32 D35 P36 F38 R40 N41 H42 K43 H44 A45 L46 G48
Gene Ontology
Molecular Function
GO:0003735
structural constituent of ribosome
Biological Process
GO:0002181
cytoplasmic translation
Cellular Component
GO:0005737
cytoplasm
GO:0005829
cytosol
GO:0005840
ribosome
GO:0022625
cytosolic large ribosomal subunit
GO:1990904
ribonucleoprotein complex
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:8p8n
,
PDBe:8p8n
,
PDBj:8p8n
PDBsum
8p8n
PubMed
UniProt
P05747
|RL29_YEAST Large ribosomal subunit protein eL29 (Gene Name=RPL29)
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