Structure of PDB 6oxi Chain R6

Receptor sequence
>6oxiR6 (length=53) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
ASEVRIKLLLECTECKRRNYATEKNKRNTPNKLELRKYCPWCRKHTVHRE
VKI
3D structure
PDB6oxi Monomeric YoeB toxin retains RNase activity but adopts an obligate dimeric form for thermal stability.
ChainR6
Resolution3.495 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna R6 A2 S3 R6 R18 R19 T23 E24 N26 N29 L34 R37 K38 Y39 P41 R44 H46 A1 S2 R5 R17 R18 T22 E23 N25 N28 L33 R36 K37 Y38 P40 R43 H45
BS02 ZN R6 C13 E15 C16 C12 E14 C15
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:6oxi, PDBe:6oxi, PDBj:6oxi
PDBsum6oxi
PubMed31501867
UniProtP35871|RL33_THET8 Large ribosomal subunit protein bL33 (Gene Name=rpmG)

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