Structure of PDB 4tud Chain R5

Receptor sequence

>4tudR5 (length=59) Species: 300852 (Thermus thermophilus HB8)

AKHPVPKKKTSKARRDARRSHHALTPPTLVPCPECKAMKPPHTVCPECGY
YAGRKVLEV

3D structure

• PDB: 4tud Structural insights into translational recoding by frameshift suppressor tRNASufJ.
• Chain: R5
• Resolution: 3.6 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	R5	A2 K3 H4 V6 P7 K8 K9 K10 T11 S12 K13 A14 R15 R16 A18 R19 R20 S21 H22 H23 T29 H43	A1 K2 H3 V5 P6 K7 K8 K9 T10 S11 K12 A13 R14 R15 A17 R18 R19 S20 H21 H22 T28 H42

Gene Ontology

Molecular Function

• GO:0003735 structural constituent of ribosome

Biological Process

• GO:0006412 translation

Cellular Component

• GO:0005840 ribosome
• GO:0015934 large ribosomal subunit
• GO:1990904 ribonucleoprotein complex

External links

• PDB: RCSB:4tud, PDBe:4tud, PDBj:4tud
• PDBsum: 4tud
• PubMed: 25352689
• UniProt: P80339|RL32_THET8 Large ribosomal subunit protein bL32 (Gene Name=rpmF)