Structure of PDB 8tj5 Chain R

Receptor sequence
>8tj5R (length=800) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
SKGANKKLNELLESSDNLPSASSELGSIQVSINELRRRVFQLRSKNKASK
DYTKAHYLLANSGLSFEDVDAFIKDLQTNQFLEPNPPKIIESEELEFYIR
TKKEENILMSIEQLLNGATKDFDNFINHNLNLDWAQHKNEVMKNFGILIQ
DKKTVDHKSRLNVNENNILREKFENYARIVFQFNNSRQANGNFDIANEFI
SILSSANGTRNAQLLESWKILESMKSKDINIVEVGKQYLEQQFLQYTDNL
YKKNMNEGLATNVNKIKSFIDTKLKKADKSWKISNLTVINGVPIWALIFY
LLRAGLIKEALQVLVENKANIKKVEQSFLTYFKAYASSKDHGLPVEYSTK
LHTEYNQHIKSSLDGDPYRLAVYKLIGRCDLSRKNIPAVTLSIEDWLWMH
LMLIKEKDAENDPVYERYSLEDFQNIIISYGPSRFSNYYLQTLLLSGLYG
LAIDYTYTFSEMDAVHLAIGLASLKLFKIDSSTRLTKKPKRDIRFANILA
NYTKSFRYSDPRVAVEYLVLITLNEGPTDVELCHEALRELVLETKEFTVL
LGKIGRDGARIPGVIEERQPLLHVRDEKEFLHTITEQAARRADEDGRIYD
SILLYQLAEEYDIVITLVNSLLSDTLSASDLDQPLVGPDDNSETNPVLLA
RRMASIYFDNAGISRQIHVKNKEICMLLLNISSIRELYFNKQWQETLSQM
ELLDLLPFSDELSARKKAQDFSNLDDNIVKNIPNLLIITLSCISNMIHIL
NESKYQSSTKGQQIDSLKNVARQCMIYAGMIQYRMPRETYSTLINIDVSL
3D structure
PDB8tj5 Implications of a multiscale structure of the yeast nuclear pore complex.
ChainR
Resolution6.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide R Y285 P426 T429 L430 S431 I432 W435 Y469 R473 Y246 P387 T390 L391 S392 I393 W396 Y430 R434
Gene Ontology
Molecular Function
GO:0005515 protein binding
GO:0017056 structural constituent of nuclear pore
Biological Process
GO:0000055 ribosomal large subunit export from nucleus
GO:0006606 protein import into nucleus
GO:0006913 nucleocytoplasmic transport
GO:0006999 nuclear pore organization
GO:0015031 protein transport
GO:0016973 poly(A)+ mRNA export from nucleus
GO:0051028 mRNA transport
Cellular Component
GO:0005634 nucleus
GO:0005635 nuclear envelope
GO:0005643 nuclear pore
GO:0016020 membrane
GO:0031965 nuclear membrane
GO:0044612 nuclear pore linkers
GO:0044615 nuclear pore nuclear basket

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8tj5, PDBe:8tj5, PDBj:8tj5
PDBsum8tj5
PubMed37738963
UniProtP34077|NIC96_YEAST Nucleoporin NIC96 (Gene Name=NIC96)

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